Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSSEHIQNKLALLPDQPGCYLMKDRQGTIIYVGKAKILKNRVRSYFSGTHDSKTQRLVQEIVDFEYIVTSSNVEALLLEINLIKKHDPRFNIRLKDDKTYPFIKITNERHPRLIITRQVKKDKGKYFGPYPNVYAANEVKRILDRLYPLRKCSTLPNKVCLYYHLGQCLAPCVFDVEASKYKEMQDEIVAFLNGGYKTVKNDLMKKMQEAAENMEFEKAGEFRDQINAIETTMEKQKMTMNDFVDRDVFGYAIDKGWMCVQVFFIRQGKLIERDVSQFPFYNDADEDFLTFIGQFYQKANHIPPQEIYLPNDVDSEAVQAVVPDTKIIVPQRGNKKDLVKLAYKNAKIALNEKFMLLERNEERTVGAVERLGEAMGIPTPSRVEAFDNSNIHGTDPVSAMVTFLDGKPSKNDYRKYKIKTVEGPDDYATMREVIRRRYWRVLKEGLPMPDLILIDGGKGQIDSAKDVLTNELGLDIPVAGLAKDDKHRTSQLLFGDPLEIVPLERNSQEFYLLQRMQDEVHRFAITFHRQLRSKTGFQSILDGIPGVGPGRKKKLLKHFGSMKKLKEASIEEIKEAGVPLNVAEEVHKHITAFNEKAKNTEQK |
2NRT Chain:A ((22-215)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PYRIEGIDISHLQGKYTVASLVVFEDGFPKKGDYRRYKIEQ-DHPDDYESIRTVVKRRYSK-----HPLPNLLFVDGGIGQVNAAIEAL-KEIGKDCPVVGLAKKEE----TVVFEN--REIHLPHDHPVLRLLVQIRDETHRFAVSYHRKRREKESLRSVLDNVPGIGPIRKKKLIEHFGSLENIRSASLEEIARVIGSTEIARRV----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NRT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52207 for 1408 contacts (-37.1/contact) +
2D Compatibility (PS) -21795 + (NN) -12237 + (LL) 29532
1D Compatibility (HY) -16400 + (ID) 4200
Total energy: -77307.0 ( -54.91 by residue)
QMean score : 0.560
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