Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIQWFPGHMAKARREVTEKLKLVDVIFELVDARIPLSSSNPMLEEIIHQKRRVIILNKADTADEKTTKEWIDYFAEKGLPAVAVNAQEGKGLFKIEQAAEKLMAEKFDRLRSKGMKPRAIRAMILGIPNVGKSTLINRLAKKNIARTGNKPGVTKAQQWIKVGKTLELLDTPGILWPKFEDQEIGYKLALTGAIKDDLLQMEEIAGYGLRFLENHYPDRLQTWLKVETVSEDPIETLAFIAEKRGLLDRYNDPDYSRAAETVVREIRQQKLGRMSFDFPNWEDEVE |
| 3CNL Chain:A ((9-248)) | ----------EKAKRQIKDLLRLVNTVVEVRDARAPFATSAYGVD--FSRKETIILLNKVDIADEKTTKKWVEFFKKQGKRVITTHKGEPRKVL--------LKKLSFDRL---------ARVLIVGVPNTGKSTIINKLKGKRA----------KGIQWFSLENGVKILDTPGILYKNIFSEDLAAKLLLVGSLPVERIEDQRI-----------FERAFEIFARSIGIESSFSEFFEDFARKRGLLKKGGVPDIERALMLFFTEVAQGKAGRVSFERP------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83651 for 1796 contacts (-46.6/contact) +
2D Compatibility (PS) -24896 + (NN) -8042 + (LL) 3496
1D Compatibility (HY) -16400 + (ID) 4050
Total energy: -133543.0 ( -74.36 by residue)
QMean score : 0.443
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