Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQNPTKEEIQHILKKAKVIAVVGLSDKPDRTSYRVSQIMQQAGYKIIPVNPN--ADEILGEKTVKHLTDIEEHVDIVNVFRRSEFLPEIAEAFDQIDADVFWAQLGIANQEAFDFLTEKGYPTVMDYCIKVAYQEMD
1IUK Chain:A ((4-133))
------QELRAYLSQAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDVFRPPSALMDHLPEVLALRPGLVWLQSGIRHPEFEKALKEAGIPVVADRCLMVEHKRL-
General information:
TITO was launched using:
RESULT:
Template:
1IUK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111601 for 1012 contacts (-110.3/contact) +
2D Compatibility (PS) -14313 + (NN) -5839 + (LL) 148
1D Compatibility (HY) -10400 + (ID) 2200
Total energy: -144205.0 ( -142.50 by residue)
QMean score : 0.690
(partial model without unconserved sides chains):
PDB file :
Tito_1IUK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IUK-query.scw
PDB file :
Tito_Scwrl_1IUK.pdb
: