Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNNIQAMRKKVEVQIADLQNETDEIAEFNQAKVLDAFQENKVSDFHFHPSTGYGYDDEGRDTLEHVYATVFKTEAALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGMRNQGQGSLKDFHIGYSSVPLLENGDVDFPLIAEKMTRKTKMIGIQRSRGYADRPSFTIDKIKEMIIFVKNINPEVIVFVDNCYGEFAEYLEPTEVGADIIAGSLIKNPGGGLAKTGGYIAGKEALIDLCGYRLTTPGIGREAGASLYSLLEMYQGFFLAPHVTAQAIKGARFTAAMLAEFGVVADPTWDAPRTDLIQSISFHNKEKMVAFAQAIQAASPVNAHVLPIGAYMPGYEDDVIMAAGTFIQGASLELTADGPIREPYQLYVQGGLTYEHVKIAVTRAIQKTL |
3FD0 Chain:A ((5-409)) | ---IQTIRKKVEQQITSLQNETDEIAEFNQAKVLDAFQENKVSDFHFNPSTGYGYDDEGRDTLERVYASVFKTEAALVRPQIISGTHAISTVLFGILRPGDELLYITGEPYDTLEEIVGIRSEGQGSLKDFQIGYDAVPLLPNGEIDYPAVSKKISANTKMIGIQRSRGYADRPSFTIEKIKEMVTFVKNINPNIIVFVDNCYGEFVERIEPTEVGADIIAGSLIKNPGGGLAKTGGYIAGRNTLVDLCGYRLTTPGIGREAGASLYSLLEMYQGFFLAPHVTAQAIKGARFTAAMLAEFGVEADPLWDAKRTDLIQSVSFHSKDKMIAFAQAIQAASPVNAHVLPIGAYMPGYEDDVIMAAGTFIQGASLELTADGPIREPYQLYVQGGLTYEHVKIAVTRAIENSL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3FD0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -220330 for 3621 contacts (-60.8/contact) +
2D Compatibility (PS) -43805 + (NN) -23929 + (LL) 48
1D Compatibility (HY) -52800 + (ID) 17750
Total energy: -358566.0 ( -99.02 by residue)
QMean score : 0.521
|
|
|