Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceVKKNLRMLALGFLISAVVLLVYNQFFSTQTKADETKATSTKAGSDENSSTWKNKYEKLLAQQEVDKATEAEAKKKAEEDAKKKAEEAKKVKSYTLKISKGDPSSKAG----DELQANGIIKSASDFDKYLRDNDYEKYIRDGSYNLKSDMSYETIAKILTHKN
1PPM Chain:E ((43-95))------------------------------------------------------------------STELPASQQSGHSVYNPSATGKELSGYTWSISYGDGSSASGNVFTDSVTVGGV--------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1PPM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 16915 for 187 contacts (90.5/contact) +
2D Compatibility (PS) -4741 + (NN) 1816 + (LL) 7568
1D Compatibility (HY) -2400 + (ID) 750
Total energy: 18408.0 ( 98.44 by residue)
QMean score : 0.508

(partial model without unconserved sides chains):
PDB file : Tito_1PPM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1PPM-query.scw
PDB file : Tito_Scwrl_1PPM.pdb: