Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDKIFQEKVGPVALTIVPTQKYKSNKIVFKFRAPLERETVTKRALLSILLETNSEKYPTQTDFRKQLANLYGANFYTTTAKKGNEHVLTVIFDMIDGQYVSDGNHILEDAFAFMEQALFRPNVANDAFNEETLTREKENLKSSLEGIYDDKIRFASKRLVEEMFRDDEFRFGSAGVLEDIDAITAKDLYEYYLQFIAEDTIEIFICGDVTKEEVMPLIEKMAFSPRPERKGIF-YTKEAPKEV--RVIHEQQAINQGKLVLGYQTETLFGDDDFVALQLANGLLGGFANSKIFINVREKASLAYYASSRIDSFK--GYMIISAGIDEVNYEQALKIIEEQVVAMKQGNFTDDELNQTKEMLINQLLETNDQAQGLIEL-VYNNVLRDANLDLENWIAKIKQATKEEV--VAAINKIKPDTIYFLSKGGEELHGKNHI |
| 3HDI Chain:A ((108-406)) | -----------------------------------------------------------------------------------------------------------------------------HSTFQKEELEKERKVVFEEIKMVDDTPDDIVHDLLSSATYGKHSLGYPILGTVETLNSFNEGMLRHYMDRFYTGDYVVISVAGNVHDE----LIDKIKETFSQVKPTTYNYQGEKPMFLPNRIVRKKET-EQAHLCLGYPGLPI-GDKDVYALVLLNNVLGGSMSSRLFQDIREKRGLCYSVFSYHSSFRDSGMLTIYAGTGHDQLDDLVYSIQETTSALAEKGLTEKELENGKEQLKGSLMLSLESTNSRMSRNGKNELLLKKHRSLDEMIEQINAVQKQDVSRLAKILLSASPSISLINANGE-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HDI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57850 for 2051 contacts (-28.2/contact) +
2D Compatibility (PS) -31760 + (NN) -19256 + (LL) 10668
1D Compatibility (HY) -16800 + (ID) 3700
Total energy: -118698.0 ( -57.87 by residue)
QMean score : 0.417
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