Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKEEMNARQKKIRNFSIIAHIDHGKSTLADRILEQTGALTHREMKNQLLDSMDLERERGITIKLNAVQLKYKAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVREEIEDV-IGLDASDA------VLASAKSGIG---IEDILEQ-------IVEKVPEPSGDVNKPLKALIFDSVFDAYRGVIANIRIMDGVVKAGDRIKMMSNGKEFEVTEVG-VFSPKATPRDELLVGDVGYLTAAIKNVGDTRVGDTITLANN----PA----EEALDGYRKLNPMVYCGLYPIDSSKYNDLRDALEKLE---LNDSALQFEAETSQALGFGFRCGFLGLLHMEIIQERIEREFNIDLITTAPSVIYHVNLTDGSNIVVDNPAEMPEPGVIESVEEPYVKATVMVPNDYVGAVMELAQNKRGNFITMEYLDDIRVSIVYEIPLSEIVYDFFDQLKSSTKG----YASFDYELIGYKASKLVKMDILLNAEKVDALSFIVHRDFAYERGKIIVEKLKELIPRQQFEVPIQAAIATKIVSRSTIKALRKNVLAKCYGGDVSRKRKLLEKQKEGKKRMKQIGSVEVPQEAFMAILKMDESK |
| 5A9W Chain:A ((3-481)) | ----------EKLRNIAIIAHVDHGKTTLVDKLLQQSGT---------------LEKERGITILAKNTA---N-----DYRINIVDTPGHADF--EVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALN---GLDHEDMAEDMTPLYQAIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDSEGKTRNAKVGKVLGHLGLERIETDLAEAGDI-VAIT---ELNISDTVCDTQNVEALPALSVDEPTVSMFFCVNTSPFCG----KEGKFVTSRQILDRLNKELVHNVALRVE-ETEDA--DAFRVSGRGELHLSVLIENMRRE-GFELAVSRPKVIFRE--IDGRK------------------QEPYENVTLDVEEQHQGSVMQALGERKGDLKNMNPDGKGRVRLDYVIP-SRGLIGFRSEFMTMTSGTGLLYSTFSH-------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5A9W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174992 for 3137 contacts (-55.8/contact) +
2D Compatibility (PS) -43382 + (NN) -6845 + (LL) 16060
1D Compatibility (HY) -20800 + (ID) 7300
Total energy: -237259.0 ( -75.63 by residue)
QMean score : 0.321
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