Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPQFFLNKRLIILLISIIVLVALVGFSLRDRENASWPEQFVKDVVGFGENIVAKPTSFISGAVDGVVDLKNTYTENQHLKERLEELAQLESEVADLKKENKDLKESLDITDSIRDYDPLNASVISRNPTNWNDQVEIDKGSSDGVKPDMAVTTPSGLIGKVTTTGAKSATVELLTSSDVKNRVSAKVQ-GKENAFGIINGYDSDTKLLELKQLPYDMKFKKGQKVVTSGLGGKFPAGIFIGTIEKVETDKMGLSQTAFIKPGADMYDLNHVTVLKRSAEAGTTDDDTTSSDTTGGQ
2QF4 Chain:A ((9-167))----------------------------------------------------------------------------------------------------------------------LAADVIMRSPVSWKQELTLDAGRSKGASENMLAIANGGLIGSVSKVEENSTIVNLLTNTENADKISVKIQHGSTTIYGIIIGYDKENDVLKISQLNSNSDISAGDKVTTGGLGNFNVADIPVGEVVATTHSTDYLTREVTVKLSADTHNVDVIELVGNS-------------------


General information:
TITO was launched using:
RESULT:

Template: 2QF4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42430 for 1244 contacts (-34.1/contact) +
2D Compatibility (PS) -17201 + (NN) -6984 + (LL) 8808
1D Compatibility (HY) -8800 + (ID) 2500
Total energy: -69107.0 ( -55.55 by residue)
QMean score : 0.545

(partial model without unconserved sides chains):
PDB file : Tito_2QF4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2QF4-query.scw
PDB file : Tito_Scwrl_2QF4.pdb: