Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LANEATQELFQVLDNTAIILQNELEISYLEAVYETGENLFQKEVLQKEELSSEKQLKLQESYESIELENFSNEEIRKGLQLALLKGMKHGIQVNHQMTPDSIGFIVAYLLEKVIQKKKNISILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR------QKMTLLHQDGLANLLVDP----------------VDVVISDLP---------VGYYPDD-ENAKTFELCREEGHSFAHFLFIEQGMRYTKP-------GGYLFFLVPDA-MFGTSDFAKVDKFIKKNGHIEGIIKLPETLFKSEQARKSILILRKADVNVKPPKEVLLANLSSLTDPSVTAPILAEIENWFKSKQ |
| 3UFB Chain:A ((205-397)) | --------------------------------------------------------------------------------------------------------VVRFMVE-VMDPQLGESVLDPACGTGGFLVEAFEHLERQ------CKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLH--GLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAET------------AMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTLFSDGISARIKEELLKNFNLHTIVRLPEGVF------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UFB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100245 for 1086 contacts (-92.3/contact) +
2D Compatibility (PS) -16458 + (NN) -10318 + (LL) 14076
1D Compatibility (HY) -11600 + (ID) 2600
Total energy: -127145.0 ( -117.08 by residue)
QMean score : 0.436
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