Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKTIFYFSYRKTEELHAKAKELKKITTDYGYELTDDYQKANVIISIGGDGAFLKSVRETGFRQDCL-YAGIALTEQLGQYCDFHINQLDEIIKAAIEDRWLVRRYPTI-----YGTVNNTKAFYVLNEFNIRSSIIRTLTMDLYINDSHFETFRGDGMVISTPTGSTAYNKSVNGSIVDPLLPSMQVSELASINNNKFRTLGSSFILSPKRKLRIEIASEEGNNEFPMIGMDSEALSIQHVHEVNLEVGDRFINIIKLPKNSFWDKVKRNFL
3V8Q Chain:A ((27-262))-------------------------------YDMEYDDVEPEIVISIGGDGTFLSAFHQYEERLDEIAFIGIH-TGHLGFYADWRPAEADKLVKLLAK--YQKVSYPLLKTTVKYG----EATYLALNESTVKSSG-GPFVVDVVINDIHFERFRGDGLCMSTPSGTTAYNKSLGGALMHPSIEAMQLTEMASINNRVYRTIGSPLVF-PKHHV---VSLQPVNDKDFQISVDELSILHRDVQEIRYEVSAKKIHFARFRSFPFWRRVHDSFI


General information:
TITO was launched using:
RESULT:

Template: 3V8Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85168 for 1691 contacts (-50.4/contact) +
2D Compatibility (PS) -24003 + (NN) -3035 + (LL) 3580
1D Compatibility (HY) -19200 + (ID) 4050
Total energy: -131876.0 ( -77.99 by residue)
QMean score : 0.306

(partial model without unconserved sides chains):
PDB file : Tito_3V8Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3V8Q-query.scw
PDB file : Tito_Scwrl_3V8Q.pdb: