Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIYHFVGIKGSGMSALAQILHDKGFQVQGSDVDKYFFTQKALEEKQIPIMTFSADNIQEGLTIIAGNAFPDTHEEIERALELGLSVIRYHKFLGQLIDGYTSIAITGSHGKTSTTGLLSHVV--GAIRPTSYLIGDGTGSGTKDA-----EYFALEACEYQRHFLAYKPTYAIMTNIDWDHPDYFKSVDDVFNAFETLGKQVKKAVFAL---------GDDAELRKLTLDI--PIIYFGFGEENEFQAKNVIKETTGTK----FDVYHREEFLSSFEIPAYGDHNVLNALSVIALCDYEGLPVEDVKNELKTFEGVKRRFS-----ITEKGNQVLVDDYAHHPSEIRATVNAARQKYPDKKVVAVFQPHTFTRTRTFLQGFADSLNLADEVYLCDIFGSAREKTGNLTIADLAHKTKGNHIIKEEHTEELLKYPEAVILFMGAGDVQKFQAAYEKVLDHEFLTEADLKKSAIN |
| 1GQY Chain:A ((22-407)) | ----HFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAEEHIEGASVVVVSSAIKDDNPELVTSKQKRIPVIQRAQMLAEIMRFRHGIAVAGTHGKTTTTAMISMIYTQAKLDPT-FVNGGLVKSAGKNAHLGASRYLIAEADESDASFLHLQPMVSVVTNMEPD-------------DFEKMKATYVKFLHNLPFYGLAVMCADDPVLMELVPKVGRQVITYGFSEQADYRIEDY--EQTGFQGHYTVICPNNERINVLLNVP--GKHNALNATAALAVAKEEGIANEAILEALADFQGAGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVGVTIKAAREGWGDKRIVMIFQPHRYSRTRDLFDDFVQVLSQVDALIMLDVYAAG------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GQY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144884 for 2790 contacts (-51.9/contact) +
2D Compatibility (PS) -37936 + (NN) -12852 + (LL) 7236
1D Compatibility (HY) -26000 + (ID) 5650
Total energy: -220086.0 ( -78.88 by residue)
QMean score : 0.415
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