Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKTLTNKLAEKEHAAVVTYIMGGDGGLDNLEEQLLFLEKSGVSAIEIGIPFSDPVADGPIIQLAGLRALKEQVSLEAILN---KLAMSKVQIPLIIMSYINPIFHLGIPKFVELVQKTPVKGLIIPDLPYEHQKLITPELQGTDIALIPLVSLTSPKERLEEIAKQAEGFIYAVTVNGTTGVRSEFD-AHIDSHLAYLKSISPVPVLAGFGVSSIEHVEKFAHVCDGVIIGSKVVQMLHEEKTAELGAFLQKAAEVRIKN
2EKC Chain:A ((9-258))
------TELKEKREKALVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLMTYYNPIFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAADEMTYFVSVTG---------YERIKKKVEEYRELCDKPVVVGFGVSKKEHAREIGSFADGVVVGSALVKLAGQKKIEDLGNLVKELKE-----
General information:
TITO was launched using:
RESULT:
Template:
2EKC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -231844 for 1975 contacts (-117.4/contact) +
2D Compatibility (PS) -26885 + (NN) -21763 + (LL) 1440
1D Compatibility (HY) -20800 + (ID) 4100
Total energy: -303952.0 ( -153.90 by residue)
QMean score : 0.725
(partial model without unconserved sides chains):
PDB file :
Tito_2EKC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EKC-query.scw
PDB file :
Tito_Scwrl_2EKC.pdb
: