Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTFLEEILAQKEVEVAKMPLEQVAEKRKTYSFYEFLKANTNTMQLIAEVKRASPSKGEINMGVNPVLQAKSYQAAGAGMISVLTDPVFFKGSIEDLREVAKNVGIPVLCKDFIISEKQLIRARNAGATVVLLIISALTEEKLITLFEQALALDLEVLVEVHDQEELAVAQKIGAQLIGVNNRNLHTFEVDIAVSERLASDFSSDACFISESGFR-TAEDVARVSQKYDAVLVGEALMREATPEVAAKSLKVTR
3T44 Chain:A ((52-258))
------------------------------------------IGVIAEVKRASPSAGALATIADPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGMTALVEVHTEQEADRALKAGAKVIGVNARDLMTLDVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVTSGDPRAAVADL----
General information:
TITO was launched using:
RESULT:
Template:
3T44.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119751 for 1812 contacts (-66.1/contact) +
2D Compatibility (PS) -22496 + (NN) -9555 + (LL) 4732
1D Compatibility (HY) -15600 + (ID) 4350
Total energy: -167020.0 ( -92.17 by residue)
QMean score : 0.501
(partial model without unconserved sides chains):
PDB file :
Tito_3T44.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3T44-query.scw
PDB file :
Tito_Scwrl_3T44.pdb
: