Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKILIGGIRLYQKYISRFTPATCR---------FYPTCSAYGIEAIQTHGALKGSYLAI----RRISKCHPFHKGGLDFVPPKKDKNADSEHSCKVHHHH
4UHX Chain:A ((56-153))
---------------ISRYNPITKRIRHHPANACLIPICSLYG-AAVTTVEGIGSTHTRIHPVQERIAKCH------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4UHX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1978 for 146 contacts (-13.5/contact) +
2D Compatibility (PS) -4367 + (NN) -1323 + (LL) 2212
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -9606.0 ( -65.79 by residue)
QMean score : -0.063
(partial model without unconserved sides chains):
PDB file :
Tito_4UHX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UHX-query.scw
PDB file :
Tito_Scwrl_4UHX.pdb
: