Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITLKSRREIDEMKAAGKILADTHKELKKIIKPGITSWDLEVFTEEFLRKNGATPEQKGFEG----YEYAICASINDEICHGFPRKQKLNQGDIITVDMVV---------------------------NYHGALADSAWTYAVGEVPDDVKHLMDVTHKALYLGIEQAQVGARVGDIGHAIQTYVESENLAVVREFIGHGVGPTLHEKPDIPHYGTAGKGPRLKEGMVITVEPMVNMGAWKAKMD-DNGWTARTVDGSLSAQYEHTFAITKDGPEILTYQGEND |
| 4KM3 Chain:A ((1-282)) | MITLKSAREIEAMDKAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKEENFLPLQIGVDGAMMDYPYATCCSLNDEVAHAFPRHYILKDGDLLKVDMVLGGPIAKSDLNVSKLNFNNVEQMKKYTQSYSGGLADSCWAYAVGTPSEEVKNLMDITKEAMYKGIEQAVVGNRIGDIGAAIQEYAESRGYGVVRDLVGHGVGPTMHEEPMVPNYGIAGRGLRLREGMVLTIEPMINTGDWEIDTDMKTGWAHKTIDGGLSCQYEHQFVITKDGPVILTSQGE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KM3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114160 for 2140 contacts (-53.3/contact) +
2D Compatibility (PS) -26503 + (NN) -5918 + (LL) -156
1D Compatibility (HY) -24400 + (ID) 6950
Total energy: -178087.0 ( -83.22 by residue)
QMean score : 0.549
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