Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNIMLVCSAGMSTSLLVKKMTEAIEKQQVDATVIAVAEADFDKYKGNV---DVVLLAPQVRFLEKNLKRVLDPLGIPVAIINGIDYGTMDGEKVLNDALAMIEK
4MGE Chain:A ((2-98))
--NILLCCSAGMSTSLLVTKMEAAAKARGLEGKIWAVSG---DAVKTNIDQADVLLLGPQVRYMLSSMKTLADERNVGIDVINPMHYGMMNGEAVLDHALTL---
General information:
TITO was launched using:
RESULT:
Template:
4MGE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87701 for 706 contacts (-124.2/contact) +
2D Compatibility (PS) -10186 + (NN) -2808 + (LL) 700
1D Compatibility (HY) -13200 + (ID) 2150
Total energy: -115345.0 ( -163.38 by residue)
QMean score : 0.710
(partial model without unconserved sides chains):
PDB file :
Tito_4MGE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MGE-query.scw
PDB file :
Tito_Scwrl_4MGE.pdb
: