Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPAVIGVIMGSTSDWDTMKKACDVLDELEIAYEKKVVSAHRTPDLMFQYAEQARERGLKIIIAGAGGAAHLPGMVAAKTTLPVIGVPIKSKALNGMDSLLSIVQMPGGVPVATVAIGESGAVNAGLLAAQILSITDDAITNRLQKRRATLEETVLESSDYLG
4B4K Chain:A ((2-157))
-KSLVGVIMGSTSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGKAGSTNAGLLAAQILGSFHDDIHDALELRREAIEKDVREG-----
General information:
TITO was launched using:
RESULT:
Template:
4B4K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126254 for 1307 contacts (-96.6/contact) +
2D Compatibility (PS) -16811 + (NN) -5960 + (LL) 200
1D Compatibility (HY) -18800 + (ID) 5900
Total energy: -173525.0 ( -132.77 by residue)
QMean score : 0.644
(partial model without unconserved sides chains):
PDB file :
Tito_4B4K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4B4K-query.scw
PDB file :
Tito_Scwrl_4B4K.pdb
: