Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LFEKTNRMNLLFDFYQELLTTKQKAYVSFYYLDDYSLGEIAEEFEVSRQAIYDNIKRTEESLEKYEEKLGMLKKYQQREKLFTQLEAQLTKKNFLDEQVKDTLEQLKNID
1XSV Chain:A ((8-110))
---KTLRMNYLFDFYQSLLTNKQRNYLELFYLEDYSLSEIADTFNVSRQAVYDNIRRTGDLVEDYEKKLELYQKFEQRREIYDEMKQHLSNP----EQIQRYIQQLEDLE
General information:
TITO was launched using:
RESULT:
Template:
1XSV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 28230 for 621 contacts (45.5/contact) +
2D Compatibility (PS) -10407 + (NN) -406 + (LL) 564
1D Compatibility (HY) 5200 + (ID) 650
Total energy: 22531.0 ( 36.28 by residue)
QMean score : 0.308
(partial model without unconserved sides chains):
PDB file :
Tito_1XSV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XSV-query.scw
PDB file :
Tito_Scwrl_1XSV.pdb
: