Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTFFKKLKDKITQQTDSVSGKFKDGLSKTRGNF-SGKINEMVARYRKVDEDFFEELEEILIGADVGFETVMELVDTLRREVQLRNISDPKDVQEVIVEKLVEIYQGDEKEDEALHIEEDGLTVILFVGVNGVGKTTSIGKMAHRFKQEGKKVMLAAGDTFRAGAIDQLEVWGERTGVDVIKQAEGSDPAAVMFDAVQAAKARKADILLCDTAGRLQNKVNLMNELEKVKRVITREIPNAPHEVLLVLDATTGQNAFVQAKQFKETTDVTGIILTKLDGTAKGGIVIAIRNELDIPVKFVGLGEQMDDLQAFDANEYVYGLFADMVDNEK
2QY9 Chain:A ((198-494))--------------------RLKRSLLKTKENLGSGFIS--LFRGKKIDDDLFEELEEQLLIADVGVETTRKIITNLTEGASRKQLRDAEALYGLLKEEMGEILA---KVDEPLNVEGKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKADDFIEALFA-------


General information:
TITO was launched using:
RESULT:

Template: 2QY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -172491 for 2570 contacts (-67.1/contact) +
2D Compatibility (PS) -32413 + (NN) -20825 + (LL) 1820
1D Compatibility (HY) -28400 + (ID) 7600
Total energy: -259909.0 ( -101.13 by residue)
QMean score : 0.614

(partial model without unconserved sides chains):
PDB file : Tito_2QY9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2QY9-query.scw
PDB file : Tito_Scwrl_2QY9.pdb: