Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTLQGKVAVVTGGSRGIGRDIAINLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVEAMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGTFLCTKAVSRTMMKQRAGKIINMASVVGLIGNAGQANYVASKAGVIGLTKTTARELAPRGINVNAVAPGFITTDMTDKLDEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYITGQTLSVDGGMVM
2UVD Chain:A ((2-246))--LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKYITGQTLNVDGGMVM


General information:
TITO was launched using:
RESULT:

Template: 2UVD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117574 for 2184 contacts (-53.8/contact) +
2D Compatibility (PS) -26357 + (NN) -4339 + (LL) 260
1D Compatibility (HY) -26000 + (ID) 8200
Total energy: -182210.0 ( -83.43 by residue)
QMean score : 0.546

(partial model without unconserved sides chains):
PDB file : Tito_2UVD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2UVD-query.scw
PDB file : Tito_Scwrl_2UVD.pdb: