Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVHIEAKQGEIAETILLPGDPLRAKYIAETFLEDVVLFNQVRGMLGFTGTYKGEKVSVMGTGMGIPSISIYVNELIQSYDVKNLIRVGTMGGIQADVKVRDVVIAQAASTDSQINRNTFAGVDFAPVADFSLLKKAYDAGIEKGLSLKVGNVFSADRFYNDQLDK-QQLADYGVLGIEMEAAALYTLAQKYGRRALAILTVSDHIFTGEETSAEERQTTFNDMIVVALEAAIK
3UAW Chain:A ((2-234))
-SVHIEAKQGEIAESILLPGDPLRAKYIAETFLEDVTCYNNVRGMLGFTGTYKGKRVSVQGTGMGVPSISIYVNELIQSYGVKNLIRVGTCGAIQKDVKVRDVIIAMTACTDSNMNRLTFPGFDFAPAANFDLLKKAYDAGTEKGLHVRVGNVLTADVFYRESMDMVKKLGDYGVLAVEMETTALYTLAAKYGVNALSVLTVSDHIFTGEETTSEERQTTFNEMIEIALDAAIQ
General information:
TITO was launched using:
RESULT:
Template:
3UAW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -175663 for 2130 contacts (-82.5/contact) +
2D Compatibility (PS) -24289 + (NN) -2969 + (LL) 208
1D Compatibility (HY) -29600 + (ID) 8800
Total energy: -241113.0 ( -113.20 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_3UAW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UAW-query.scw
PDB file :
Tito_Scwrl_3UAW.pdb
: