Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRIGMRTVKTAIAATLAIILAEWLHLEYAVSAGIIAILSVQNTKKGSLQLAIQRVYSTVLALSIAAVFFMLIGYNAVSFGLYLLIFIPLAVRLHVADGIVVSSVLVSHILLEQSLSFFWFKNELLLMAVGAGIAIILNLYMPKMEDELKRSQQKIEAIMRQILTEMTQGLRNQSEYHDEFG-------LLNQLKGTLDYAQEKAARNLDNQFFASSHYYSQYVDMRLVQYRILTQMKRHLVAFDHSSEQSMALAEITEKTAQTLDEHNTAEDLVAEITKMVHEFRSSKLPETRAEFENRAILFQFMNDLRYLLEMKRDFYAEFGLKEKEMTRGR |
2PFF Chain:B ((-1572)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------RADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIRENY---SAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQPALTLMEKAAFEDL------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PFF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 22416 for 544 contacts (41.2/contact) +
2D Compatibility (PS) -9116 + (NN) 1421 + (LL) 24380
1D Compatibility (HY) 10800 + (ID) 0
Total energy: 49901.0 ( 91.73 by residue)
QMean score : 0.060
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