Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQNGKVKWFNNEKGYGFIESDGGEDIFVHFTAIQGDGYKSLEEGQAVTFEVVEGNRGAQAANVEKA
1HZC Chain:A ((1-65))
MQEGKVKWFNNEKGYGFIEVEGGSDVFVHFTAIQGEGFKTLEEGQAVSFEIVQGNRGPQAANVVK-
General information:
TITO was launched using:
RESULT:
Template:
1HZC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25386 for 429 contacts (-59.2/contact) +
2D Compatibility (PS) -6919 + (NN) -2094 + (LL) 144
1D Compatibility (HY) -7600 + (ID) 2600
Total energy: -44455.0 ( -103.62 by residue)
QMean score : 0.692
(partial model without unconserved sides chains):
PDB file :
Tito_1HZC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HZC-query.scw
PDB file :
Tito_Scwrl_1HZC.pdb
: