Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPNILDSLWNSMALFLSALFFHGMALRSIREKKPAWFQIKFANEFINYALGIYYGLLGVYFIIRGLPGTDSGIYTDMLLNILIVLHLFSSAGPATIALLLIVSGKLFLGDALFANLIYVFLIIGFHFVCMEVAKLRLSSVQKVVLVKLSAIPLMLFYLHQKIHLAYTMNDLPVWILYFLVSFFITFIIVSAAYYIDTSNKLIYDLQQSTILDPLTGLTNFRHFENAFDAAFNHATLKKSNLSVIIIDIDYFKRVNDTYGHLVGNGVLSTFSQMLLKISFPPNTVISRIGGEEFAIILPNINVSETEHLAEKIRRKVEKI----DVPIVASGSVITISAGIAN-YDGRNYPSANELLNAADQALYNAKRNGRNQVHIRETEPVI |
3I5B Chain:A ((6-170)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DGLTGLSNRRHFDEYLEMEWRRSLREQSQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCSRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRRTVESLQISHDQP--RPGSHLTVSIGVSTLVPGGGGQTFRVLIEMADQALYQAKNNGRNQVGLME----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I5B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90244 for 1281 contacts (-70.4/contact) +
2D Compatibility (PS) -18065 + (NN) -14560 + (LL) 20624
1D Compatibility (HY) -10000 + (ID) 3300
Total energy: -115545.0 ( -90.20 by residue)
QMean score : 0.559
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