Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKWKKSLAGLSSYKPGKREEEVMAELGLTKITKLSSNENPLGTSPK-VAALQANSNVETEIYPDGWASSLRKEVTNFYQLEEEELIFTAGVDELIELLTRVLLDTTKNTVMATPTFVQYRQNALIEGAEVREIPLLTDGAHDLEGMLNAIDEKTTIVWICNPNNPTGNYIDLADIQAFLDKVPSDILVVLDEAYIEYVT-PQPKKH---EKLIRTYKNLIITRTFSKIYGLASARVGYGIADKEIINQLNIVRPPFNTTSIGQKLAIEAIKDQAFIEACRISNANGIKQYEAFAKRFEQVKLYPANGNFVLIDLGIEARTIFS-YLEKNGYITRSGAALGFPTAVRITIGKEEENSAVIALLEKLL |
3GET Chain:A ((3-364)) | -KFNEFLNNLSNYEPGKDIEVIAKEYGVKEVIKLASNENPFGTPPKAIECLRQNAN-KAHLYPDDSMIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNLDEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANANIISAFYKLRAPFNVSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKK-HNIKIIDSYTNFITYFFDEKNSTDLSEKLLKKGIIIRNLKSYGL-NAIRITIGTSYENEKFFTEFDKIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GET.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156748 for 2934 contacts (-53.4/contact) +
2D Compatibility (PS) -39460 + (NN) -25277 + (LL) 392
1D Compatibility (HY) -27200 + (ID) 6000
Total energy: -254293.0 ( -86.67 by residue)
QMean score : 0.535
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