Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEAIKVESLTKNYHKKRAIENVDLSVNEGELYGFIGPNGAGKSTTIKVLLNFIYATSGGATILGKDVVKDSAEIKKMVGYVPSEVRYYPQMTANDIIHYAAKFHHIENAT--QKMNKYYEMFSIDPK-KRF-GEMSLGNKKKVAIVAGLITEPQLFILDEPTNGLDPLMQHYLFKEMTERNKEGMTIFLSSHNLREVQEYCTRAAFIRNGNIIA---VEDIANQQMTGKVIALKGTNLPLEKLTNAGARIIEKEMGKARLIFDDDIKTILPLLQEKEITDLTITNQELEDKFMTLYEGGEIK |
4RVC Chain:A ((2-232)) | -TLLEVKDLSGGYTAQNVLEDVTFVVDRGEMVALIGLNGAGKSTTIKHIIGLMEPRRGAISINGYRLADGPETYRRQFAYIPETPVLYEELTLEEHLRLAAMAYGLSEAEYERRLPPLLREFRLERRLSSFPAHFSKGMKQKVMIVCAFLLEPPLYIIDEPFLGLDPLAIHALLERMNEQKAKGAGILLSTHILATAERYCDSFVILHNGRVKAKGTLDDIRRQ------FGLRGASL---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RVC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133144 for 1729 contacts (-77.0/contact) +
2D Compatibility (PS) -24007 + (NN) -10660 + (LL) 5720
1D Compatibility (HY) -19600 + (ID) 3600
Total energy: -185291.0 ( -107.17 by residue)
QMean score : 0.466
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