Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDKQKEQLSVEVARLYYQADLGQQEIATRLGVSRPTVSRLLQNAKTKGYVKIEVQDPFSNLTELAVALKEKYQLKNVTVAFSQTNDYSEITKQISQSAAEYLEEIIHDGDILGVSWGTTMYKIAQKLSPLKAE-IKVVQLKGGVSHSDVNTYAAETLALFGAAYDTAPVSLPLPVVLDNPLAKQMVEADRHIKNIIELGKKANIAIFTVGTVRDEALLFRLGYFSDQEKARLKEKAVGDICSRFFTIDGEIADEKMDERTIGINLQELKQKETAILVAGGERKIKAIHGALRGGYANHFITDQFTAKQLLEQNFIN |
4OQQ Chain:A ((10-261)) | ----------------------------------------------------------EDLDALGSILEEKYGLLEAHVVFSPTPDYAGITHDLSRYGAEYMHETVKDGDIVGVSWGTTMYQIAQNMQPKQVKGVEVVQLKGGISHSRVNTYSAETIQLFAEAFQTMPRYLPLPVVFDNADVKRMVEKDRHIERIIEMGKQANIALFTVGTVRDEALLFRLGYFNEEEKALLKKQAVGDICSRFFDAKGNICSSAINDRTIGVELQDLRLKERSILVAGGSRKVSSIHGALTGKYANVLIIDQHTARALV------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OQQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149664 for 2163 contacts (-69.2/contact) +
2D Compatibility (PS) -27429 + (NN) -12234 + (LL) 5152
1D Compatibility (HY) -27600 + (ID) 7550
Total energy: -219325.0 ( -101.40 by residue)
QMean score : 0.661
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