Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKERVIIVGSGISGCTAALRLMQDYDVTIIT-KGYKEESNSMLAQGGVAAAVSK--NDTPKKHFSDTFQAGCFHNKVLAVNQLVTHGPMVIQKLIAEGMAFDEQ-DGELALGLEGAHQL--------PRILHTGGDQTGKFLTTFLQEKL-T-DIHWQEQKMAIEIIKQNDSAIGVHCLD-KENRLHTYYGEHIILASGGLGQLFPVTTNAATISGDGLALAYRAGAKLTDMEFIQFHPTLLFLNGRCHGLISEAVRGEGAKLIRADGSAIMTDVHPRA-DLAPRDIVAATLFAEIQD-------GNEVFLDITAIP--NFEKRFPGITAN-LDAHHIPFRETKRIPVHPGAHFLMGGIRTDLSGK---------TNIPGLYAIGEVANAGVHGANRLASNSLLETLVFGEKVAEYIRTQKINPIDHP--E------IP-L-----SNQIQTPHLPDKQLLQEKIWETLGITRKPEKITEFLHWLTDFDYAN-------------H-TRKTAEISHMLITAKLIAESALKRTESLGAHRILKGVIK |
| 2H88 Chain:A ((17-557)) | -HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCV-ADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYG---AGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTIEIREGRGCGPEKDHVYLQLHHLPPQQLATRLPGISETAMIFAGVDVT-KEPIPVLPTVHYNMGGIPTNYKGQVITHVNGEDKVVPGLYACGEAASASVHGANRLGANSLLDLVVFGRACALTIAETCKPGEPVPSIKPNAGEESVANLDKLRFADGTIRTSEARLNMQKTMQSHAAVFRTGSILQEGCEKLSQIYRDLAHLKTFDRGIVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKLR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2H88.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222548 for 4508 contacts (-49.4/contact) +
2D Compatibility (PS) -49661 + (NN) -5455 + (LL) -12
1D Compatibility (HY) -18400 + (ID) 7200
Total energy: -303276.0 ( -67.28 by residue)
QMean score : 0.457
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