Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLSNKFKSFFFLDEEEEYYEEEVAREPEPMQKKTKKEKPNKNRFYAVEEDDAKVVSMQGAQFSSRMVLAEPRVYAEAQELADYLKEYKSVVVNLQRISHDQATRIVDFLSGTVYALGGDIQRVGNNIFLCTPDNVEVDGSISEMLDEQNFM
3ZII Chain:A ((5-86))
---------------------------------------------------------------SSKVVLSEPRVYAEAQEIADHLKNRRAVVVNLQRIQHDQAKRIVDFLSKTVYAIGGDIQRIGSDIFLCTPDNVDVSGTISEL-------
General information:
TITO was launched using:
RESULT:
Template:
3ZII.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61015 for 558 contacts (-109.3/contact) +
2D Compatibility (PS) -8799 + (NN) -1509 + (LL) 5092
1D Compatibility (HY) -10800 + (ID) 3100
Total energy: -80131.0 ( -143.60 by residue)
QMean score : 0.656
(partial model without unconserved sides chains):
PDB file :
Tito_3ZII.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZII-query.scw
PDB file :
Tito_Scwrl_3ZII.pdb
: