Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VSLYMLVSTFAVAFIITVIGVPLFIPFLVKLKFGQSIRDEGPKMHEKKSGTPTMGAVVFITAMLISFLVFSFISGEVSAATWLLFIALALFGALGFLDDYIKVVQKRNLGLTSKQKFLGQVVISILFYLVYHFNDFAETLNIPFTNIEVDLGWFFVIFILFWLVGFSNAVNLTDGLDGLVSGLSVIAFSAFGVIAFYQEQMDVAIFCFAIVGGMLGFLLFNKNPAKIFMGDTGSLALGGSIAAISILVHQEWLLLLIGIIFVIETASVILQVFYFKATGGKRIFRMTPIHHHFELGGWSEWRVVLTFWGIGLVGAIISVCVVIF |
| 3LPA Chain:A ((121-171)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GVAGVAYGAKVVPVRALGRCGGYDS--DISDGLYWAAGGRIAGIPENRNPAKV------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LPA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26292 for 234 contacts (-112.4/contact) +
2D Compatibility (PS) -5415 + (NN) -429 + (LL) 24712
1D Compatibility (HY) -800 + (ID) 750
Total energy: -8974.0 ( -38.35 by residue)
QMean score : -0.059
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