Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFDWLTNSTAIIIILPVVV-FILTMFFSSFKLKKSQRRIMLAADLSTIFLIIAVHFFMIVLFNRSFLLYILLF-LFILGIVIVVTAAKKEGEIQFRKILRGYWRLCFFIFALLYVALYLYGIVYSLVLMF
4K0E Chain:A ((859-941))
----------LAVILPMVLALMFVLLFGEFKNLRQPALILMAVPLATLGGLVALHLRGMTLNVSSAVGFIALFGVAVLNAIIMI----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4K0E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74205 for 410 contacts (-181.0/contact) +
2D Compatibility (PS) -7373 + (NN) -3626 + (LL) 5980
1D Compatibility (HY) -9600 + (ID) 1000
Total energy: -89824.0 ( -219.08 by residue)
QMean score : 0.215
(partial model without unconserved sides chains):
PDB file :
Tito_4K0E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4K0E-query.scw
PDB file :
Tito_Scwrl_4K0E.pdb
: