Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LLKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKE-PLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAITK
1HX5 Chain:A ((5-96))
-IKPLEDKILVQA-----TTASGLVIP------PQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAV--
General information:
TITO was launched using:
RESULT:
Template:
1HX5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28453 for 512 contacts (-55.6/contact) +
2D Compatibility (PS) -8460 + (NN) 1109 + (LL) 1196
1D Compatibility (HY) -10000 + (ID) 2250
Total energy: -46858.0 ( -91.52 by residue)
QMean score : 0.640
(partial model without unconserved sides chains):
PDB file :
Tito_1HX5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HX5-query.scw
PDB file :
Tito_Scwrl_1HX5.pdb
: