Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKVIVACGSGVATSQTVASKVERILKEKGVRATVEAVDIKSLEQHIKTSDVYVAITKANKEFDIPTLNGIAFLTGMGMDEETEKLLNALK
2L2Q Chain:A ((7-54))
---ILLVCGAGMSTSMLV-QRIEKYAKSKNINATIEAIAETRLSEVVDRFDV---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2L2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21083 for 246 contacts (-85.7/contact) +
2D Compatibility (PS) -5088 + (NN) -1129 + (LL) 3344
1D Compatibility (HY) -4800 + (ID) 800
Total energy: -29556.0 ( -120.15 by residue)
QMean score : 0.653
(partial model without unconserved sides chains):
PDB file :
Tito_2L2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L2Q-query.scw
PDB file :
Tito_Scwrl_2L2Q.pdb
: