Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIIGIAACTSGIAHTYIAKEKLTKAGLALGHNVHIETQGTIGIEDELSAEQVKNADVVIIAADIKISGKDRFKGKRVVEIPTDLAIKAPKQIINKIDKEINN
2R48 Chain:A ((3-95))
--LLAITSCPNGIAHTYMAAENLQKAADRLGVSIKVETQGGIGVENKLTEEEIREADAIIIAADRSVN-KDRFIGKKLLSVGVQDGIRKPEELIQK-------
General information:
TITO was launched using:
RESULT:
Template:
2R48.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -736 for 699 contacts (-1.1/contact) +
2D Compatibility (PS) -9612 + (NN) -1417 + (LL) 440
1D Compatibility (HY) 2400 + (ID) 900
Total energy: -9825.0 ( -14.06 by residue)
QMean score : 0.185
(partial model without unconserved sides chains):
PDB file :
Tito_2R48.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R48-query.scw
PDB file :
Tito_Scwrl_2R48.pdb
: