Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKIKSFLGKSLTLVVLGVFLFSGWKIGMELYENKHNQTILDDAKAVYTKDAAT-TNVNGEVRDELRDLQKLNKDMVGWLTIIDTEIDYPILQSKDNDYYLHHNYKNEKARAGSIFKDYRNTNEFLDKNTIIYGHNMKDGSMFADLRKYLDKDFLVAHPTFSYESGLTNYEVEIFAVYETTTDFYYIETEFPETTDFEDYLQKVKQQSVYTSNVKVSGKDRIITLSTCDTEKDYEKGRMVIQGKLVTK |
| 2OQW Chain:A ((42-253)) | -----------------------------------NRKVMAEAQNIYEKSPMEEQS---EVRKQFKALQQINQEIVGWITMDDTQINYPIVQAKDNDYYLFRNYKGEDMRAGSIFMDYRNDVKSQNRNTILYGHRMKDGSMFGSLKKMLDEEFF-SHRKLYYDTLFEGYDLEVFSVYTTT---YYIETDFSSDTEYTSFLEKIQEKSLYKTDTTVTAGDQIVTLST-DYAL----GRLVVHAKLVKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OQW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 89170 for 1382 contacts (64.5/contact) +
2D Compatibility (PS) -19280 + (NN) 6206 + (LL) 3336
1D Compatibility (HY) 10000 + (ID) 300
Total energy: 89132.0 ( 64.49 by residue)
QMean score : -0.046
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