Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVTLYTSPSCTSCRKARAWLEEHDIPYKERNIFSEPLSLDEIKEILRMTEDGTDEIISTRSKTFQKLNVDLDSLPLQQLFELIQKNPGLLRRPIIIDEKRLQVGYNEDEIRRFLPRRVRTYQLREAQKMVN
3GFK Chain:A ((1-118))
MVTLYTSPSCTSCRKARAWLEEHEIPFVERNIFSEPLSIDEIKQILRMTEDGTDEIISTRSKVFQKLNVNVESMPLQDLYRLINEHPGLLRRPIIIDEKRLQVGYNEDEIRRFLPRKV-------------
General information:
TITO was launched using:
RESULT:
Template:
3GFK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67979 for 807 contacts (-84.2/contact) +
2D Compatibility (PS) -12951 + (NN) -7898 + (LL) 1392
1D Compatibility (HY) -16800 + (ID) 5050
Total energy: -109286.0 ( -135.42 by residue)
QMean score : 0.736
(partial model without unconserved sides chains):
PDB file :
Tito_3GFK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GFK-query.scw
PDB file :
Tito_Scwrl_3GFK.pdb
: