Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQKLIYFLSQTH-IRSAIAEAWAKRLSLSNVKFISGSWHKSKSTPFIAEALNEFAIEPPESLSYSPSSELLADADLIVTIYDSAHETAPKFPANIQEKIIYWDIDDPEQEIAL-PQKWASYQEVCDNIALSVKNLEHVLIEA
1JL3 Chain:A ((3-132))
--NKIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIEAHGLNPNAVKAMKEVGIDISNQTSDIIDSDILNNADLVVTLCGDAADKCPMTPPHVKRE--HWGFDDPARAQGTEEEKWAFFQRVRDEIGNRLK---------
General information:
TITO was launched using:
RESULT:
Template:
1JL3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56451 for 1006 contacts (-56.1/contact) +
2D Compatibility (PS) -14026 + (NN) -8371 + (LL) 1732
1D Compatibility (HY) -8000 + (ID) 2050
Total energy: -87166.0 ( -86.65 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_1JL3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JL3-query.scw
PDB file :
Tito_Scwrl_1JL3.pdb
: