Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNIVLVCAAGMSTSLLVTKMRKAAEERGETCEIEAYSIAEVSNLIDDADVVLLGPQVRYQKKTVDELAAGK-IPVDVIDMAAYGTMNGEKVLGQALDLINGFQK
4MGE Chain:A ((2-101))
--NILLCCSAGMSTSLLVTKMEAAAKARGLEGKIWAVSGDAVKTNIDQADVLLLGPQVRYMLSSMKTLADERNVGIDVINPMHYGMMNGEAVLDHALTLKKG---
General information:
TITO was launched using:
RESULT:
Template:
4MGE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88495 for 764 contacts (-115.8/contact) +
2D Compatibility (PS) -11019 + (NN) -3760 + (LL) 588
1D Compatibility (HY) -10800 + (ID) 2700
Total energy: -116186.0 ( -152.08 by residue)
QMean score : 0.694
(partial model without unconserved sides chains):
PDB file :
Tito_4MGE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MGE-query.scw
PDB file :
Tito_Scwrl_4MGE.pdb
: