Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYPQLSKEVAPNEIEAEMITNRGTIRIKLFPEIAPKTVENFVTHSKNGYYDGLIFHRVIPEFMIQGGDPDGRGTGGESIWGESFEDEFSTEAFNLR-GALSMANAGPNTNGSQFFIVQKPDMPADMLGQMEQAGFPVEVIEAYKQGGTPWLDGRHTVFGHVIEGMDVVDEIANLPTGMQDKPVNDVVIEKINIK
2FU0 Chain:A ((7-158))
---------------SAIIYTTMGDIHISLFYKECKKTVQNFSVHSINGYYNNCIFHRVIKHFMVQTGDPSGDGTGGESIWGNEFEDEFFDHLNHSKPFMVSMANCGPNTNGSQFFITTVP---------------------------CPWLDFKHTVFGKVTQGSKIVLDIEKVRTDKRDKPLEDIKILNIKI-
General information:
TITO was launched using:
RESULT:
Template:
2FU0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67570 for 1193 contacts (-56.6/contact) +
2D Compatibility (PS) -16028 + (NN) -7959 + (LL) 2796
1D Compatibility (HY) -12800 + (ID) 4100
Total energy: -105661.0 ( -88.57 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_2FU0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FU0-query.scw
PDB file :
Tito_Scwrl_2FU0.pdb
: