Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIQIALSIGLLLYSISTFLYLYRILKGPTTSDKVVALDSIGMNLVAIVALLSMFYDTHAFLDVILLIALLAFIGTVSFAKFIEKGKVIDRERDN
1WAZ Chain:A ((41-68))
-----------------------------------------------------------GYLDYVLLPALAIFIGLTIYAIQRKRQA--------
General information:
TITO was launched using:
RESULT:
Template:
1WAZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7579 for 103 contacts (-73.6/contact) +
2D Compatibility (PS) -3010 + (NN) -369 + (LL) 6104
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -7354.0 ( -71.40 by residue)
QMean score : 0.016
(partial model without unconserved sides chains):
PDB file :
Tito_1WAZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WAZ-query.scw
PDB file :
Tito_Scwrl_1WAZ.pdb
: