Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MENDSLCGGHILQEGLHVRFARMHIWAVTRYTSNGRMGMRIFDRWWMDFGGG
1KA5 Chain:A ((10-31))
-----------DETGIHARPATMLVQTASKFDS-------------------
General information:
TITO was launched using:
RESULT:
Template:
1KA5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7186 for 89 contacts (-80.7/contact) +
2D Compatibility (PS) -2275 + (NN) 725 + (LL) 876
1D Compatibility (HY) 400 + (ID) 300
Total energy: -7760.0 ( -87.19 by residue)
QMean score : -0.477
(partial model without unconserved sides chains):
PDB file :
Tito_1KA5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KA5-query.scw
PDB file :
Tito_Scwrl_1KA5.pdb
: