Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLPKDLLYTEEHEWVKAD-DGSYVIGITDFAQDQLGDIVFVELPEVGDTVTKGDSIGSIESVKTVSDFYAPVTGKVVAVNETLEDEPELINSNPYDTGWILKLEEVEEADVKALLSSDDYEKVLD
3A7L Chain:A ((2-126))
-NVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLE
General information:
TITO was launched using:
RESULT:
Template:
3A7L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43147 for 992 contacts (-43.5/contact) +
2D Compatibility (PS) -13073 + (NN) -2582 + (LL) 208
1D Compatibility (HY) -12800 + (ID) 3200
Total energy: -74594.0 ( -75.20 by residue)
QMean score : 0.718
(partial model without unconserved sides chains):
PDB file :
Tito_3A7L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A7L-query.scw
PDB file :
Tito_Scwrl_3A7L.pdb
: