Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSALELKNVSFSRKRDFEMKNVSASIPEGKITTLIGPNGSGKSTMLRLMMRLLTPDSGEILLNEKNITEIPSKDLAK---KMTMLSQAPEG-LVDVMVHDLVAYG----RLPHRSWLSTLQEEDEAVIHWAIKVCNLEELAYRPLHSLSGGERQRAWLAMALAQKTPILLLDEPTTYLDIAHQLELLDLLVHLNKEYNLTIVLVLHDLNQAAIYSDHVFVCENGQLVKDGSPREVFT-TELLRDV-------FHITADITEKDGKQHIHPLASTRFEY
3GFO Chain:A ((24-254))-------------------LKGINMNIKRGEVTAILGGNGVGKSTLFQNFNGILKPSSGRILFDNKPI-DYSRKGIMKLRESIGIVFQDPDNQLFSASVYQDVSFGAVNMKLP--------EDEIRKRVDNALKRTGIEHLKDKPTHCLSFGQKKRVAIAGVLVMEPKVLILDEPTAGLDPMGVSEIMKLLVEMQKELGITIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAEKEVIRKVNLRLPRIGHLMEI--------------------


General information:
TITO was launched using:
RESULT:

Template: 3GFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -161324 for 1599 contacts (-100.9/contact) +
2D Compatibility (PS) -23557 + (NN) -15015 + (LL) 3504
1D Compatibility (HY) -18000 + (ID) 3750
Total energy: -218142.0 ( -136.42 by residue)
QMean score : 0.523

(partial model without unconserved sides chains):
PDB file : Tito_3GFO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GFO-query.scw
PDB file : Tito_Scwrl_3GFO.pdb: