Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANVHVINHPLVQHKLTIIRDKNTGTKAFRELVDEVATLMAYEITRDMELEDIQVETPLQTTTAKTLTGKKLGIVPILRAGLGMQDGILKLIPAAKVGHVGLYRDHDTLEPVEYFVKLPSDVEERLFIVVDPMLATGGSAIMAIDCLKKRG--ARNMKFMCLVAAPEGVKALQDAHPDVEIYVAGLDEKLDENGYIRPGLGDAGDRLFGTK
3DMP Chain:A ((9-213))
--NLFILDHPLIQHKLTHMRDKDTSTRTFRELLREITLLMGYEITRNLPITTKRVETPLVEIDAPVIAGKKLAIVPVLRAGVGMSDGLLELIPSARVGHIGVYRADDH-RPVEYLVRLP-DLEDRIFILCDPMVATGYSAAHAIDVLKRRGVPGERLMFLALVAAPEGVQVFQDAHPDVKLYVASLDSHLDDHAYIVPGLGDAGDRLFG--
General information:
TITO was launched using:
RESULT:
Template:
3DMP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -173198 for 1613 contacts (-107.4/contact) +
2D Compatibility (PS) -21675 + (NN) -4629 + (LL) 616
1D Compatibility (HY) -25600 + (ID) 6150
Total energy: -230636.0 ( -142.99 by residue)
QMean score : 0.565
(partial model without unconserved sides chains):
PDB file :
Tito_3DMP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DMP-query.scw
PDB file :
Tito_Scwrl_3DMP.pdb
: