Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIRVPATTANLGPGFDSCGLALTLYLTLDIG-------AEADSWYIEHNIGGGIPHD-ETNVIIETALNLAPNL---TPHHLVMTCDIPPARGLGSSSAAVVAGIELANTLAELNLSKEEKVRIAAEIEG------HPDNVAPAVLGNWVVGAKLDGEDFYVRHL--FPDCALIAFIPKAELLTSESRGVLPDTLPFKEAVQASSIANVMIAAILRNDMTLAGEMMERDLWHEKYRSQLVPHLAQIRDVAKNQGAYAACLSGAGPTVLVFA-----PRNLANKLQTS-LQTLEIDADVLLLDVEGSGAEVFR |
| 4RPF Chain:A ((3-306)) | VKIYAPASIGNVSVGFDVLGAAVSPIDGTLLGDCVSVTAAERFSLHNEGRFVSKLPDDPKQNIVYQCWERFCQEMGKEIPVAMVLEKNMPIGSGLGSSACSVVAGLMAMNEFCGQPLDKVTLLGMMGELEGRVSGSIHFDNVAPCYLGGMQL--ILEQEGYISQDVPGFSDWLWVMAYPGIKVSTAEARAILPAQYRRQDCITHGRNLAGFIHACHTQQPDLAAKMM-KDVIAEPYRTQLLPGFAAARQAAQDIGALACGISGSGPTLFAVCNDQATAQRMAGWLQNHYLQNDEGFVHICRLDTAGA------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RPF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161511 for 2366 contacts (-68.3/contact) +
2D Compatibility (PS) -30251 + (NN) -10602 + (LL) 576
1D Compatibility (HY) -17200 + (ID) 4300
Total energy: -223288.0 ( -94.37 by residue)
QMean score : 0.444
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