Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLNEQQITRLLYRLQDPVLEASLEETEGVLEVQVLEETANIKIALADPAVETDHFVHNIEELLTQFGVNEINIELEYLPAAVIDRIFQARDNILSEASETKFLAIASGKGGVGKSTVSANLAIALAQQGKKVGLLDADIYGFSIPVLLGTTESPHKENGQII-------PVETH--GIQMISMDFFVEQGEPVIWRGPMLGKMIKMFLEEVRWGKLDYLLIDLPPGTGDVALDIHTLIPKCNELIVTTPHYAAASVASRAGYMAAKNNHKIIGVIENMSYLTLAD-GQVLKVFGQGGGEKVAADLETQLLIQLPIEQPEPNGNGYVSALFNSSSTSGKAYKTLAEKIIPYLS |
3KB1 Chain:A ((21-229)) | ------------------------------------------------------------------------------------------------------IAVMSGKGGVGKSTVTALLAVHYAKQGKKVGILDADFLGPSIPHLFGL------EKGKVAVSDEGLEPVLTQRLGIKVMSIQFLL-----------LIAGMIREFLGRVAWGELDYLLIDLPPGTGDAPLTVMQDAKPNGAVIVSTPQELTAAVVEKAITMAEQTKTAVLGIVENMAYFECPNCGERTYLFGEGKASELARKYKIEFITEIPID------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KB1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122364 for 1519 contacts (-80.6/contact) +
2D Compatibility (PS) -20573 + (NN) -7944 + (LL) 11356
1D Compatibility (HY) -19200 + (ID) 4200
Total energy: -162925.0 ( -107.26 by residue)
QMean score : 0.439
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