Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADRNQRKVYTGRVVSDKMDKTITVVVETYKKHGLYGKRVKYSKKFKAHDENNIAKTGDVVRISETRPLSATKHFRLLEVVEEAVII
1QD7 Chain:I ((5-84))
-----QRKVYVGRVVSDKMDKTITVLVETYKKHPLYGKRVKYSKKYKAHDEHNEAKVGDIVKIMETRPLSATKRFRLVEIVEKAV--
General information:
TITO was launched using:
RESULT:
Template:
1QD7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 478780 for 2926 contacts (163.6/contact) +
2D Compatibility (PS) -7885 + (NN) 2797 + (LL) 544
1D Compatibility (HY) 400 + (ID) 500
Total energy: 474136.0 ( 162.04 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_1QD7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QD7-query.scw
PDB file :
Tito_Scwrl_1QD7.pdb
: