Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDSAYVFDSEQATKLLMKNYELVKTSGVSFIDKRIRFLIARLFAGNNEVVNPERFNEINKEIKRQLGMFTALNGNVRASLVGLLMANNNASRESVQQVIANYNTLIQAGFQRTEYTYFAAYLLLESENPTKTAQKAKTIHQLFKKDHPFLTKSEDVTTAVFLANLPEENTTELAEVTEYYFQEFAAKGFRKNDSLQFLATTGTLLYGEKDS-KFIRRVDNIVEELRQKGIKVKPIHYSSIGILAFVMDGRKIDSGLVNLIDELQQQPGLRFGREFVTALAISLYTEKQSGQMSKEQLEGLMVNVHILIAMEQAAAVSAAAAASAAAASS
3DNF Chain:A ((167-281))----------------------------------------------------------------------------------------------------------------------------------QNEEFFKEVVGEIALWVKEVKVINTICNATS--LRQES-VKKLAP---EVDVMIIIGGKNSGNTRR---LYYISKEL-NPNTYHIETAEELQPE--------WFRGVKRVGISAGASTPDWIIEQVKSRIQEI------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3DNF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13651 for 721 contacts (-18.9/contact) +
2D Compatibility (PS) -11761 + (NN) -1830 + (LL) 18412
1D Compatibility (HY) 2400 + (ID) 700
Total energy: -7130.0 ( -9.89 by residue)
QMean score : 0.264

(partial model without unconserved sides chains):
PDB file : Tito_3DNF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DNF-query.scw
PDB file : Tito_Scwrl_3DNF.pdb: