Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDSAYVFDSEQATKLLMKNYELVKTSGVSFIDKRIRFLIARLFAGNNEVVNPERFNEINKEIKRQLGMFTALNGNVRASLVGLLMANNNASRESVQQVIANYNTLIQAGFQRTEYTYFAAYLLLESENPTKTAQKAKTIHQLFKKDHPFLTKSEDVTTAVFLANLPEENTTELAEVTEYYFQEFAAKGFRKNDSLQFLATTGTLLYGEKDS-KFIRRVDNIVEELRQKGIKVKPIHYSSIGILAFVMDGRKIDSGLVNLIDELQQQPGLRFGREFVTALAISLYTEKQSGQMSKEQLEGLMVNVHILIAMEQAAAVSAAAAASAAAASS |
3DNF Chain:A ((167-281)) | ----------------------------------------------------------------------------------------------------------------------------------QNEEFFKEVVGEIALWVKEVKVINTICNATS--LRQES-VKKLAP---EVDVMIIIGGKNSGNTRR---LYYISKEL-NPNTYHIETAEELQPE--------WFRGVKRVGISAGASTPDWIIEQVKSRIQEI------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DNF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13651 for 721 contacts (-18.9/contact) +
2D Compatibility (PS) -11761 + (NN) -1830 + (LL) 18412
1D Compatibility (HY) 2400 + (ID) 700
Total energy: -7130.0 ( -9.89 by residue)
QMean score : 0.264
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