Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRFMQIWKPAVIGFLLLTLVCGVLYPGVVTVFAGVAFHDKANGSIIEEKLADGTTGKVGSAEIGQTFTEPEYLIGRAASDGVATNLNPTSEEQKQLVEKRIAWWHKLDPTNNRVIPMDLVTASASGVDPDISEAAAAYQVDRISRERGISTKEVKEIIAEHTSNRLLGFWGEPTVNVLQVNLALDRLKM |
| 1YFI Chain:A ((110-158)) | ---------------------------------------------------------------------------------------------------------------SSRLVPLNIKHSSKKKV------SIAEYDVETICTGVGISDGELKELIRKHQNDQ------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YFI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6154 for 196 contacts (-31.4/contact) +
2D Compatibility (PS) -5267 + (NN) -579 + (LL) 9744
1D Compatibility (HY) -4400 + (ID) 800
Total energy: -7456.0 ( -38.04 by residue)
QMean score : 0.390
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