Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQTELVNQIEVKLRKIYQAAYQPAYLEKMLACAENYSNNTRGSIDTISEKNVYLIAYGDSIFEKNKHPLQTLNEFLQEYAQDAITDVHLLPIFPST-SDDGFSVTDYKQIDEQLGDWDDV-----QKMSENFRVMLDFVANHMSKSSDWFKRF---------SDNEAPYNQFFIEKDSQFDYKNV----TRPRTSPLFHKYENGKELWTTFSEDQLDLNVRNIDCLVALTDVLLFYASKQATSIRLDAIGFLWKTSGTTCMHLPETHEIISLWRLLIDELYPNLQIITETNVPHEENISYFG-DGKNEANMVYQFPLPPLVLHTFTCHDTTKLSKWAKSISQVSDTATYFNFLASHDGIGMRPATGILSDEEINSLVQKAVQNGGQVSYKDNADGTQSVYELNINYG---EALQNLDEDTTEELVTKKIIAAHSILLTLQGVPAIYYHSLLGSKNDLVGYEESGINRRINREKLEKNQLVHELKTDTY------------RKTIFTSLK----------KLVQIRRNHTAFSPFATQEILDLGPDVFAIKRESEGECIYGIINVTSH------DISKKVAFSGTNLLANQPVTSELELTAYEVVWIKKAVQ |
| 4TVU Chain:A ((55-542)) | ----------------------------------------------------------------------------------------LLPWFPSPLRDDGYDVADYRGIHPDLGTLDDFKVFLREAHARGLWVIGDLVTNHTSSDHPWFQAARRGPTLPDGSPNE--YHDYYVWSDEGKEYADTRIIFTDTEVSNWTLDEQAGKYYWHRFFASQPDLNYDNPKVVEELHGAARFWLDLGLDGFRVDAVPYLIEREGTSCENLPETHEILKGFRAMVDREYPGRLLLAEANQWPEEVVEYFGTEAEPEFHMCFNFPVMPRLYMSLKREDTSSIREIMGRLPKIPSFGQWCIFLRNHDELTLE----MVTDDERAFMY---------AAYAPDA-------RMKINVGIRRRLAPLLDND------RRRIELLNTVLLALPGSPVLYYGDEIGMGDDLGLPDRNGVRTPMQWNAGTSGGFSTAQPSDCFFPPIQDPVYGFGRVNVQSQLQDPSSLLKWTARQLELRRAHPAFAHGDLTFIETGNPAILAFTRQYDGETLLIVSNFAGNAQAGLLDLAPFVGRAPVTLSGASPLPVVTGNGQYPVV------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TVU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137345 for 3342 contacts (-41.1/contact) +
2D Compatibility (PS) -45390 + (NN) -10297 + (LL) 9168
1D Compatibility (HY) -28000 + (ID) 6200
Total energy: -218064.0 ( -65.25 by residue)
QMean score : 0.361
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